BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D11LP1|AL425372
(1047 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1647 1984 0.0
>3x_Contig1647
Length = 14353
Score = 1984 bits (999), Expect = 0.0
Identities = 1024/1031 (99%), Gaps = 2/1031 (0%)
Strand = Plus / Plus
Query: 3 ttaccgttgaatttcattgatgctcctgaagacaaaaaattgaacgccttgttcaacaat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1405 ttaccgttgaatttcattgatgctcctgaagacaaaaaattgaacgccttgttcaacaat 1464
Query: 63 gcaaaggccatattggaacagtatctagtgaaggaacaagaaatcattgcatcccaattt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1465 gcaaaggccatattggaacagtatctagtgaaggaacaagaaatcattgcatcccaattt 1524
Query: 123 gtatacaaggagtatgaagctttcgttgaaataccttaccaagaatatttacagcagatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 gtatacaaggagtatgaagctttcgttgaaataccttaccaagaatatttacagcagatt 1584
Query: 183 gaaagcttaatcgagagaattgcgaaaggtgaaaacgaattagaacccgatgctattaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 gaaagcttaatcgagagaattgcgaaaggtgaaaacgaattagaacccgatgctattaaa 1644
Query: 243 cttacagaggagttaatgaaggtgaccctagatggattagcatacttgacaacatacaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 cttacagaggagttaatgaaggtgaccctagatggattagcatacttgacaacatacaat 1704
Query: 303 tggagatttatcagaaccattgtaacactaggtttccttggttggattgtttattcattc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1705 tggagatttatcagaaccattgtaacactaggtttccttggttggattgtttattcattc 1764
Query: 363 tccattttcttgagattattcattctaaacagagattataattctcataagtcacttctg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1765 tccattttcttgagattattcattctaaacagagattataattctcataagtcacttctg 1824
Query: 423 aactatttcatttttggttcccttacaatcattctcaattacgtgctctactatcaaaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 aactatttcatttttggttcccttacaatcattctcaattacgtgctctactatcaaaaa 1884
Query: 483 gctcctttcaactattacatgtacttattcttcccattgatcttctggtctgaaattttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1885 gctcctttcaactattacatgtacttattcttcccattgatcttctggtctgaaattttt 1944
Query: 543 actgaccgcgttgtgttagacgacggtgtgaaagagtttttgaagggtatttcaattccg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 actgaccgcgttgtgttagacgacggtgtgaaagagtttttgaagggtatttcaattccg 2004
Query: 603 aaaagaataatccttgtatctgcaatcattcttgtctacgaatccatcgtttacgcattc 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2005 aaaagaataatccttgtatctgcaatcattcttgtctacgaatccatcgtttacgcattc 2064
Query: 663 tttgaccgttggattttttcattaattttcaatatgctttccttttatcctttaatctgt 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 tttgaccgttggattttttcattaattttcaatatgctttccttttatcctttaatctgt 2124
Query: 723 ggatacagagattggaagaggaacactctttggttcatcacaggcgcastattctctgtt 782
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2125 ggatacagagattggaagaggaacactctttggttcatcacaggcgcagctatctctgtt 2184
Query: 783 tttaccttactcgatgcggtaaaaatcgaaagtttaacccaaattaacattgctagtgga 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 tttaccttactcgatgcggtaaaaatcgaaagtttaacccaaattaacattgctagtgga 2244
Query: 843 ttaattgtactgactgccctctcaggtttcttacaccttcgtaagcrattaaacagctac 902
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2245 ttaattgtactgactgccctctcaggtttcttacaccttcgtaagcaattaaacagctac 2304
Query: 903 actacaacggtatttatttgccaaatattgctcgttattttgatggttctggccacgaat 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2305 actacaacggtatttatttgccaaatattgctcgttattttgatggttctggccacgaat 2364
Query: 963 aaaatcaatcgtttcgctacaaaatagaaccgggtta-cacgagatgcacaagttgctgg 1021
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2365 -aaatcaatcgtttcgctacaaaatagaaccgggttaccacgagatgcacaagttgctgg 2423
Query: 1022 ctgggtaattt 1032
|||||||||||
Sbjct: 2424 ctgggtaattt 2434
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8770
Number of Sequences: 1807
Number of extensions: 8770
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 1047
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1031
effective length of database: 10,329,639
effective search space: 10649857809
effective search space used: 10649857809
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)